Search found 8 matches

by kathryndaveson
Wed Oct 15, 2014 3:26 am
Forum: Bug Reporting
Topic: mdata file = NULL
Replies: 5
Views: 3379

Re: mdata file = NULL

I am not sure if I have sorted it by what I did or I was just lucky. However, the file I was using when it happened had covariates in it but they weren't listed in the model file. I thought that if you weren't using them it would just ignore them but perhaps I was wrong. When I added the covariate n...
by kathryndaveson
Tue Oct 14, 2014 3:29 am
Forum: How Do I...?
Topic: Ptas from original population data
Replies: 4
Views: 2771

Ptas from original population data

I am trying to generate PTA for my original data that I fed into the model and I obviously have the "path" wrong. "Error in path.expand(paths) : invalid 'path' argument" What is the best file to do this from( presuming it is possible)? I tried: pta.1 <- makePTA(pop.1,targets=c(0.0625,0.125,0.25,0.5,...
by kathryndaveson
Tue Oct 14, 2014 12:30 am
Forum: Bug Reporting
Topic: mdata file = NULL
Replies: 5
Views: 3379

Re: mdata file = NULL

NP_RF0001.txt files of the three folders in question ended with the designated csv file name so no go there and completely different names for the data and text files. :(
by kathryndaveson
Mon Oct 13, 2014 8:20 am
Forum: Bug Reporting
Topic: mdata file = NULL
Replies: 5
Views: 3379

mdata file = NULL

I have been running successful NPruns with the model graph being displayed in the resulting webpage.

When I go to PMload the run into the environment, on occasion, the mdata file (and only the mdata file) is empty = NULL (empty). Every other file is full of observations.

Any ideas?

Kathryn
by kathryndaveson
Fri Oct 10, 2014 10:06 am
Forum: How Do I...?
Topic: AUC from patient data
Replies: 6
Views: 3167

Re: AUC from patient data

But will the auc function do an auc 0-24 for each real patient if your file only goes to certain time points? E.g. if you limit the AUC time to end = 24 will it go to 24 hours even if the actual data points finish before this time in a 1 compartment model?
by kathryndaveson
Fri Oct 10, 2014 9:53 am
Forum: How Do I...?
Topic: AUC from patient data
Replies: 6
Views: 3167

Re: AUC from patient data

Ah.. I thought I had worked it out with dose~time in the formula but that didn't work either - shall try . Ta!
by kathryndaveson
Fri Oct 10, 2014 6:51 am
Forum: Courses and Conferences
Topic: Liverpool Workshop October 2014
Replies: 2
Views: 7454

Re: Liverpool Workshop October 2014

And another question - can you clarify the java problem fix. I am still struggling with the PMcheck! I have check the task manager and Rstudio seems to be 32 bit. Of course my IE and Chrome are 32 bit. So do I need to install a new 64-bit chrome/IE and also a 64 bit java (I think you said this is th...
by kathryndaveson
Fri Oct 10, 2014 6:37 am
Forum: How Do I...?
Topic: AUC from patient data
Replies: 6
Views: 3167

AUC from patient data

I am trying to plot AUC data from actual patient files. I realise that they are all individually in the out001 file in the outputs folder but want to histogram plot the AUCS of the actual patient data before I start modelling. The out001 file is a "file" presumably that can be converted to txt so I ...